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  palfinder

  pal_finder is a perl script that finds microsatellite repeat elements directly from raw 454 or Illumina paired-end sequencing reads. It then designs PCR primers to amplify these repeat loci (Potentially Amplifiable Loci: PAL).

  4 weekly downloads
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  shellcrypt shell obfuscation

  This tool will allow obfuscation of UNIX scripts listing an interpreter as the first line. It is most useful for distributing functionality in a commercial product or a high user volume environment where you wish to hide proprietary information.

  4 weekly downloads
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  Mac TeX Toolbox

  The Mac TeX Toolbox provides an umbrella for TeX related development for Mac OS X: discussions, pointers to libraries and other support for open source TeX development on Mac OS X.

  1 weekly downloads
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  Perl Shell (MOVED TO URL BELOW)

  MOVED TO: http://gnp.github.com/psh/

  2 weekly downloads
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  Pudge's Projects

  Various open source projects of pudge's that don't need their own project. For module bugs, see http://rt.cpan.org/.

  2 weekly downloads
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  AAARF Genomic Repeat Investigation

  AAARF, written in PERL and with numerous adjustable parameters, identifies sequence overlaps in small shotgun sequence datasets and walks them out to create long pseudomolecules representing the most abundant repeats in a genome.

  3 weekly downloads
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  Build FW1 Cisco Netscreen PolicyFromLogs

  These three tools build Checkpoint, Cisco ASA or Netscreen policys from logfiles. They write dbedit, access-list or set address, set service and set policy commands for the traffic seen in the logs, that can be cut and pasted into the firewalls. WOOT

  3 weekly downloads
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  Downlets

  With Downlets you can download: - Apple Quicktime Movie Trailers - Norton Antivirus Windows Definition Files and make them active (Replace Life Update) - Linux McAfee Virus files (with Eicar Test) - All avaible Dilbert Comic Strips (one month back)

  3 weekly downloads
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  MAVEN

  Elastic network models (ENMs) have been shown to generate the dominant functional equilibrium motions of biomolecules quickly and efficiently. MAVEN simplifies ENM generation, allows for diverse models to be used, and facilitates useful analyses.

  3 weekly downloads
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  MicroGP

  A multi-purpose extensible self-adaptive evolutionary algorithm

  3 weekly downloads
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  PanOCT

  Pan-genome Ortholog Clustering Tool

  3 weekly downloads
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  Paperboy WDM

  Paperboy WDM is a web development framework built around the concept of separating logic, content, and presentation without the complexities of SQL. It uses Paperboy RSS as a translation layer between content (in XML) and presentation.

  3 weekly downloads
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  PrestonFTP

  A Simple (but soon to be robust) ftp client. It features a low-bloat design, and has its own install script.

  3 weekly downloads
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  ReferenceFree

  Scripts for reference free genomic analysis

  3 weekly downloads
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  Salp Wars

  Experimental multiplayer 2D network platform game where you and your mouse friends engage in vomit combat.

  3 weekly downloads
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  SisIYA

  SisIYA a system monitoring tool

  3 weekly downloads
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  Web Accessibility Solution : CDL

  Confort de lecture (i.e. Visually Comfort) or CDL is a software which allows the visually disabled people accessing intranet and websites. The core technology of the software rests on a filter which displays the Web pages according user's disability. Facebook : http://www.facebook.com/Confortdelecture http://www.facebook.com/groups/310270469033652/ Google Plus : https://plus.google.com/103614147592864703282

  3 weekly downloads
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  jpgresize

  jpgresize.pl resizes a couple of JPG images simultaniously.

  3 weekly downloads
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  prlplot

  PERL Plot : Plotting program for DSP and Communications. Includes multi-column, scatter,bar,pole-zero,eye diagrams, log-log, polar , polar db and other plot types.

  3 weekly downloads
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  ps-watcher: perl monitor a via ps.

  This program runs ps periodically and can match against process patterns trigger if some ps-property about them exists. For example it might be used to ensure that a daemon is running or is not running too many times. It might be used to determine wh

  3 weekly downloads
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  sCalc

  A GUI program written in Perl and utilizing Tk that is meant to solve equations commonly found in math and science. Current equation set is based upon High School Geometry, Algebra II, Trigonometry, and Chemistry with more to come.

  3 weekly downloads
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  sldb

  sldb is the embedded database for syslog. It captures log messages to a disk-backed database, and sorts them by user-defined subject. Excess messages from each bin are pruned on a first-in, first out basis.

  3 weekly downloads
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  tpl

  Tpl makes it easy to serialize your C data using just a handful of API functions. The data is stored in its native binary form for maximum efficiency. C, Perl and XML supported. Data is portable across CPU types and OS's from Unix to Mac to Windows.

  3 weekly downloads
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  Alist System Inventory Software

  Alist is a program that collects hardware and software information about systems and stores it in a database for users to browse and search via a Web interface. The program consists of three parts: a client portion that collects the information, a daemon

  2 weekly downloads
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  Apache::MP3

  In combination with the Apache web server and mod_perl, Apache::MP3 lets you create a virtual jukebox of your MP3, WAV and Ogg Vorbis music files, browse them over the web, create playlists, and stream them.

  2 weekly downloads

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