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root/NeuroML2/examples/NML2_SynapseTypes.nml

Revision 922, 0.9 KB (checked in by pgleeson, 3 months ago)

Updating comments/descriptions of ComponentTypes? in Synapses
Adding initial Computational Neuroscience Ontology references (e.g. synapse, stp, etc) for definign types. Not as new attribute (e.g. cnoTerm="cno_0009", etc) but at end of description. Will have to discuss how best to add refs to cno in LEMS at NeuroML 2012
Updated name of <plasticity> type. This is specific to short term plasticity, so renamed stpMechanism

Line 
1<?xml version="1.0" encoding="UTF-8"?>
2
3<neuroml xmlns="http://www.neuroml.org/schema/neuroml2"
4    xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
5    xsi:schemaLocation="http://www.neuroml.org/schema/neuroml2  ../Schemas/NeuroML2/NeuroML_v2alpha.xsd"
6    id="NML2_SynapseTypes">
7
8    <!-- Some examples of the currently supported synapse types -->
9
10    <expOneSynapse id="sy1" gbase="0.5nS" erev="0mV" tauDecay="3ms" />
11
12    <expTwoSynapse id="SimpleSynapse" gbase="0.5nS" erev="0mV" tauRise="1ms" tauDecay="2ms" />
13
14    <nmdaSynapse id="nmdaSyn" gbase="0.5nS" erev="0mV" tauRise="2ms" tauDecay="8ms">
15        <voltageConcDepBlock species="mg" blockConcentration="1.2 mM" scalingConc="1.920544 mM" scalingVolt="16.129 mV"/>
16    </nmdaSynapse>
17
18    <stpSynapse id="STP_NML2" gbase="1nS" erev="0mV" tauRise="0.1ms" tauDecay="2ms">
19        <stpMechanism initReleaseProb="0.5" tauFac="0 ms" tauRec="120 ms" />
20    </stpSynapse>
21
22</neuroml>
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